Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc9P09633 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.94■□□□□ 0.46
Hoxc9P09633 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Hoxc9P09633 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc9P09633 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.94■□□□□ 0.46
Hoxc9P09633 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC17.94■□□□□ 0.46
Hoxc9P09633 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC17.94■□□□□ 0.46
Hoxc9P09633 Gm19309-201ENSMUST00000218295 205 ntBASIC17.94■□□□□ 0.46
Hoxc9P09633 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc9P09633 Gm9823-201ENSMUST00000051212 327 ntBASIC17.94■□□□□ 0.46
Hoxc9P09633 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc9P09633 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc9P09633 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc9P09633 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hoxc9P09633 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc9P09633 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc9P09633 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hoxc9P09633 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.93■□□□□ 0.46
Hoxc9P09633 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Hoxc9P09633 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.93■□□□□ 0.46
Hoxc9P09633 Gm1335-201ENSMUST00000121653 386 ntBASIC17.93■□□□□ 0.46
Hoxc9P09633 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC17.93■□□□□ 0.46
Hoxc9P09633 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC17.93■□□□□ 0.46
Hoxc9P09633 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.93■□□□□ 0.46
Hoxc9P09633 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC17.93■□□□□ 0.46
Hoxc9P09633 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.93■□□□□ 0.46
Hoxc9P09633 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.93■□□□□ 0.46
Hoxc9P09633 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
Hoxc9P09633 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Hoxc9P09633 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Hoxc9P09633 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Hoxc9P09633 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hoxc9P09633 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.93■□□□□ 0.46
Hoxc9P09633 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Hoxc9P09633 Gm22018-201ENSMUST00000104357 131 ntBASIC17.92■□□□□ 0.46
Hoxc9P09633 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC17.92■□□□□ 0.46
Hoxc9P09633 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Gm13886-201ENSMUST00000117876 1183 ntBASIC17.92■□□□□ 0.46
Hoxc9P09633 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Gm19184-201ENSMUST00000196798 928 ntBASIC17.92■□□□□ 0.46
Hoxc9P09633 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC17.92■□□□□ 0.46
Hoxc9P09633 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC17.92■□□□□ 0.46
Hoxc9P09633 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Hoxc9P09633 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
Hoxc9P09633 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Hoxc9P09633 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hoxc9P09633 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC17.91■□□□□ 0.46
Hoxc9P09633 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.91■□□□□ 0.46
Hoxc9P09633 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Hoxc9P09633 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Hoxc9P09633 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Hoxc9P09633 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Hoxc9P09633 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Gm6013-201ENSMUST00000212264 699 ntBASIC17.91■□□□□ 0.46
Hoxc9P09633 Gm45880-201ENSMUST00000213041 853 ntBASIC17.91■□□□□ 0.46
Hoxc9P09633 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hoxc9P09633 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms