Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
P06344 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.42□□□□□ -0.42
P06344 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
P06344 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.42□□□□□ -0.42
P06344 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.42□□□□□ -0.42
P06344 Gm18027-201ENSMUST00000218947 619 ntBASIC12.42□□□□□ -0.42
P06344 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.42□□□□□ -0.42
P06344 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Gm9797-201ENSMUST00000052902 613 ntBASIC12.42□□□□□ -0.42
P06344 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.42□□□□□ -0.42
P06344 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.42□□□□□ -0.42
P06344 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
P06344 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
P06344 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
P06344 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.41□□□□□ -0.42
P06344 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
P06344 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.41□□□□□ -0.42
P06344 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.41□□□□□ -0.42
P06344 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.41□□□□□ -0.42
P06344 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.41□□□□□ -0.42
P06344 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.41□□□□□ -0.42
P06344 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.41□□□□□ -0.42
P06344 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.41□□□□□ -0.42
P06344 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.41□□□□□ -0.42
P06344 Gm10766-202ENSMUST00000194123 606 ntBASIC12.41□□□□□ -0.42
P06344 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.41□□□□□ -0.42
P06344 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.41□□□□□ -0.42
P06344 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
P06344 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.4□□□□□ -0.42
P06344 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
P06344 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.42
P06344 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.4□□□□□ -0.42
P06344 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.4□□□□□ -0.42
P06344 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
P06344 Gm4804-201ENSMUST00000182234 999 ntBASIC12.4□□□□□ -0.42
P06344 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
P06344 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.4□□□□□ -0.42
P06344 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.4□□□□□ -0.42
P06344 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.4□□□□□ -0.42
P06344 Gm42612-201ENSMUST00000197986 623 ntBASIC12.4□□□□□ -0.42
P06344 Gm43170-201ENSMUST00000199827 612 ntBASIC12.4□□□□□ -0.42
P06344 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms