Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Acot6-202ENSMUST00000222921 3622 ntBASIC14.1□□□□□ -0.15
PdgfrbP05622 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Gm15460-201ENSMUST00000118147 391 ntBASIC14.1□□□□□ -0.15
PdgfrbP05622 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.1□□□□□ -0.15
PdgfrbP05622 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PdgfrbP05622 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC14.1□□□□□ -0.15
PdgfrbP05622 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.1□□□□□ -0.15
PdgfrbP05622 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PdgfrbP05622 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC14.1□□□□□ -0.15
PdgfrbP05622 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.1□□□□□ -0.15
PdgfrbP05622 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.1□□□□□ -0.15
PdgfrbP05622 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
PdgfrbP05622 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PdgfrbP05622 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PdgfrbP05622 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PdgfrbP05622 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC14.09□□□□□ -0.15
PdgfrbP05622 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.09□□□□□ -0.15
PdgfrbP05622 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.09□□□□□ -0.15
PdgfrbP05622 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.09□□□□□ -0.15
PdgfrbP05622 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.09□□□□□ -0.15
PdgfrbP05622 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.09□□□□□ -0.15
PdgfrbP05622 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 AC153961.1-201ENSMUST00000217760 385 ntBASIC14.09□□□□□ -0.15
PdgfrbP05622 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.09□□□□□ -0.15
PdgfrbP05622 Gm9229-201ENSMUST00000222777 126 ntBASIC14.09□□□□□ -0.15
PdgfrbP05622 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.09□□□□□ -0.15
PdgfrbP05622 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PdgfrbP05622 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.09□□□□□ -0.15
PdgfrbP05622 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PdgfrbP05622 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PdgfrbP05622 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.08□□□□□ -0.15
PdgfrbP05622 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PdgfrbP05622 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PdgfrbP05622 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PdgfrbP05622 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
PdgfrbP05622 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
PdgfrbP05622 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
PdgfrbP05622 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PdgfrbP05622 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PdgfrbP05622 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.08□□□□□ -0.16
PdgfrbP05622 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PdgfrbP05622 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.08□□□□□ -0.16
PdgfrbP05622 Gm14767-201ENSMUST00000121559 586 ntBASIC14.08□□□□□ -0.16
PdgfrbP05622 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.08□□□□□ -0.16
PdgfrbP05622 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.08□□□□□ -0.16
PdgfrbP05622 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Gm43930-201ENSMUST00000203868 845 ntBASIC14.08□□□□□ -0.16
PdgfrbP05622 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.08□□□□□ -0.16
PdgfrbP05622 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC14.08□□□□□ -0.16
PdgfrbP05622 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.08□□□□□ -0.16
PdgfrbP05622 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PdgfrbP05622 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PdgfrbP05622 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PdgfrbP05622 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms