Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Col4a1P02463 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC16.83■□□□□ 0.28
Col4a1P02463 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a1P02463 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC16.83■□□□□ 0.28
Col4a1P02463 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC16.83■□□□□ 0.28
Col4a1P02463 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.83■□□□□ 0.28
Col4a1P02463 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a1P02463 n-R5s195-201ENSMUST00000082891 119 ntBASIC16.83■□□□□ 0.28
Col4a1P02463 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a1P02463 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a1P02463 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a1P02463 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a1P02463 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a1P02463 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a1P02463 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a1P02463 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a1P02463 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col4a1P02463 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Col4a1P02463 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a1P02463 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a1P02463 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a1P02463 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a1P02463 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Col4a1P02463 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a1P02463 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a1P02463 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.82■□□□□ 0.28
Col4a1P02463 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC16.82■□□□□ 0.28
Col4a1P02463 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a1P02463 Gm38341-201ENSMUST00000195357 515 ntBASIC16.82■□□□□ 0.28
Col4a1P02463 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.82■□□□□ 0.28
Col4a1P02463 Gm4959-201ENSMUST00000197271 1044 ntBASIC16.82■□□□□ 0.28
Col4a1P02463 Gm43822-201ENSMUST00000200285 476 ntBASIC16.82■□□□□ 0.28
Col4a1P02463 Gm7783-201ENSMUST00000204795 781 ntBASIC16.82■□□□□ 0.28
Col4a1P02463 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC16.82■□□□□ 0.28
Col4a1P02463 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.82■□□□□ 0.28
Col4a1P02463 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a1P02463 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a1P02463 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC16.82■□□□□ 0.28
Col4a1P02463 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a1P02463 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC16.82■□□□□ 0.28
Col4a1P02463 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a1P02463 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a1P02463 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col4a1P02463 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a1P02463 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a1P02463 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Col4a1P02463 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Col4a1P02463 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.82■□□□□ 0.28
Col4a1P02463 Gm11591-201ENSMUST00000120063 702 ntBASIC16.81■□□□□ 0.28
Col4a1P02463 Gm13786-201ENSMUST00000122371 333 ntBASIC16.81■□□□□ 0.28
Col4a1P02463 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Col4a1P02463 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.81■□□□□ 0.28
Col4a1P02463 Gm27243-201ENSMUST00000183964 521 ntBASIC16.81■□□□□ 0.28
Col4a1P02463 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC16.81■□□□□ 0.28
Col4a1P02463 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.81■□□□□ 0.28
Col4a1P02463 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a1P02463 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a1P02463 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a1P02463 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a1P02463 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a1P02463 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Col4a1P02463 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Col4a1P02463 Gm7809-201ENSMUST00000153199 742 ntBASIC16.81■□□□□ 0.28
Col4a1P02463 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.81■□□□□ 0.28
Col4a1P02463 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.81■□□□□ 0.28
Col4a1P02463 Gm29396-201ENSMUST00000185659 716 ntBASIC16.81■□□□□ 0.28
Col4a1P02463 Gm38144-201ENSMUST00000192790 465 ntBASIC16.81■□□□□ 0.28
Col4a1P02463 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.81■□□□□ 0.28
Col4a1P02463 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a1P02463 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a1P02463 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Col4a1P02463 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Col4a1P02463 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC16.81■□□□□ 0.28
Col4a1P02463 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.8■□□□□ 0.28
Col4a1P02463 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a1P02463 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a1P02463 Gm42872-201ENSMUST00000200026 1967 ntBASIC16.8■□□□□ 0.28
Col4a1P02463 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a1P02463 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a1P02463 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a1P02463 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a1P02463 Gm3890-201ENSMUST00000182416 207 ntBASIC16.8■□□□□ 0.28
Col4a1P02463 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC16.8■□□□□ 0.28
Col4a1P02463 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC16.8■□□□□ 0.28
Col4a1P02463 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a1P02463 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC16.8■□□□□ 0.28
Col4a1P02463 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a1P02463 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a1P02463 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a1P02463 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Col4a1P02463 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a1P02463 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a1P02463 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Col4a1P02463 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Col4a1P02463 Gm22323-201ENSMUST00000103832 109 ntBASIC16.79■□□□□ 0.28
Col4a1P02463 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC16.79■□□□□ 0.28
Col4a1P02463 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC16.79■□□□□ 0.28
Col4a1P02463 Gm8801-201ENSMUST00000173255 1064 ntBASIC16.79■□□□□ 0.28
Col4a1P02463 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Col4a1P02463 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms