Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Igh-VJ558P01758 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igh-VJ558P01758 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.06□□□□□ -0.48
Igh-VJ558P01758 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.06□□□□□ -0.48
Igh-VJ558P01758 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igh-VJ558P01758 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igh-VJ558P01758 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Igh-VJ558P01758 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Gm44344-201ENSMUST00000200287 129 ntBASIC12.05□□□□□ -0.48
Igh-VJ558P01758 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Igh-VJ558P01758 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Gm10766-202ENSMUST00000194123 606 ntBASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Gm6888-201ENSMUST00000221983 706 ntBASIC12.04□□□□□ -0.48
Igh-VJ558P01758 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Igh-VJ558P01758 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Igh-VJ558P01758 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 73.8 ms