Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcnkO88874 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcnkO88874 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CcnkO88874 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CcnkO88874 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CcnkO88874 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.43□□□□□ -0.42
CcnkO88874 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
CcnkO88874 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.43□□□□□ -0.42
CcnkO88874 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
CcnkO88874 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.43□□□□□ -0.42
CcnkO88874 Mir8117-201ENSMUST00000184773 107 ntBASIC12.43□□□□□ -0.42
CcnkO88874 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.43□□□□□ -0.42
CcnkO88874 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.43□□□□□ -0.42
CcnkO88874 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.43□□□□□ -0.42
CcnkO88874 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.43□□□□□ -0.42
CcnkO88874 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
CcnkO88874 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CcnkO88874 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.42□□□□□ -0.42
CcnkO88874 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CcnkO88874 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CcnkO88874 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC12.42□□□□□ -0.42
CcnkO88874 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CcnkO88874 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.42□□□□□ -0.42
CcnkO88874 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.42□□□□□ -0.42
CcnkO88874 Gm13464-201ENSMUST00000119418 935 ntBASIC12.42□□□□□ -0.42
CcnkO88874 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
CcnkO88874 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Gm7063-201ENSMUST00000186840 981 ntBASIC12.42□□□□□ -0.42
CcnkO88874 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.42□□□□□ -0.42
CcnkO88874 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
CcnkO88874 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.42□□□□□ -0.42
CcnkO88874 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
CcnkO88874 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
CcnkO88874 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CcnkO88874 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CcnkO88874 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CcnkO88874 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.41□□□□□ -0.42
CcnkO88874 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CcnkO88874 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.41□□□□□ -0.42
CcnkO88874 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.41□□□□□ -0.42
CcnkO88874 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcnkO88874 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms