Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Lmx1bO88609 Gm15957-201ENSMUST00000118893 974 ntBASIC12.64□□□□□ -0.39
Lmx1bO88609 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.64□□□□□ -0.39
Lmx1bO88609 Gm12490-201ENSMUST00000120255 560 ntBASIC12.64□□□□□ -0.39
Lmx1bO88609 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.64□□□□□ -0.39
Lmx1bO88609 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC12.64□□□□□ -0.39
Lmx1bO88609 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lmx1bO88609 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lmx1bO88609 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.64□□□□□ -0.39
Lmx1bO88609 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.64□□□□□ -0.39
Lmx1bO88609 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Gm6745-201ENSMUST00000199216 526 ntBASIC12.64□□□□□ -0.39
Lmx1bO88609 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.64□□□□□ -0.39
Lmx1bO88609 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lmx1bO88609 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.64□□□□□ -0.39
Lmx1bO88609 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lmx1bO88609 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.64□□□□□ -0.39
Lmx1bO88609 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.64□□□□□ -0.39
Lmx1bO88609 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Lmx1bO88609 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lmx1bO88609 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lmx1bO88609 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lmx1bO88609 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lmx1bO88609 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.63□□□□□ -0.39
Lmx1bO88609 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.63□□□□□ -0.39
Lmx1bO88609 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Lmx1bO88609 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Gm6912-201ENSMUST00000117218 544 ntBASIC12.63□□□□□ -0.39
Lmx1bO88609 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Lmx1bO88609 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.63□□□□□ -0.39
Lmx1bO88609 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.63□□□□□ -0.39
Lmx1bO88609 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lmx1bO88609 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lmx1bO88609 Gm6180-201ENSMUST00000065243 498 ntBASIC12.63□□□□□ -0.39
Lmx1bO88609 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lmx1bO88609 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lmx1bO88609 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.63□□□□□ -0.39
Lmx1bO88609 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Lmx1bO88609 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lmx1bO88609 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lmx1bO88609 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
Lmx1bO88609 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lmx1bO88609 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Lmx1bO88609 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.62□□□□□ -0.39
Lmx1bO88609 Gm12091-201ENSMUST00000146791 830 ntBASIC12.62□□□□□ -0.39
Lmx1bO88609 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Lmx1bO88609 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Lmx1bO88609 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.62□□□□□ -0.39
Lmx1bO88609 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.62□□□□□ -0.39
Lmx1bO88609 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lmx1bO88609 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms