Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC12.9□□□□□ -0.34
Tnfrsf17O88472 Gm25927-201ENSMUST00000175058 117 ntBASIC12.9□□□□□ -0.34
Tnfrsf17O88472 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf17O88472 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf17O88472 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf17O88472 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf17O88472 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.9□□□□□ -0.34
Tnfrsf17O88472 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf17O88472 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC12.9□□□□□ -0.34
Tnfrsf17O88472 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf17O88472 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf17O88472 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf17O88472 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Tnfrsf17O88472 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf17O88472 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tnfrsf17O88472 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Tnfrsf17O88472 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Tnfrsf17O88472 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Tnfrsf17O88472 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Tnfrsf17O88472 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 B9d1os-201ENSMUST00000137010 674 ntBASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Gm26927-201ENSMUST00000182385 965 ntBASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Gm42550-201ENSMUST00000201553 960 ntBASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Tnfrsf17O88472 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Gm22334-201ENSMUST00000158070 133 ntBASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.88□□□□□ -0.35
Tnfrsf17O88472 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfrsf17O88472 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfrsf17O88472 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfrsf17O88472 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfrsf17O88472 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms