Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trdmt1O55055 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trdmt1O55055 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trdmt1O55055 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.28■□□□□ 0.04
Trdmt1O55055 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.28■□□□□ 0.04
Trdmt1O55055 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.27■□□□□ 0.04
Trdmt1O55055 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.27■□□□□ 0.04
Trdmt1O55055 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.27■□□□□ 0.04
Trdmt1O55055 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trdmt1O55055 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Trdmt1O55055 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trdmt1O55055 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.27■□□□□ 0.04
Trdmt1O55055 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trdmt1O55055 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.27■□□□□ 0.04
Trdmt1O55055 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 Gm8584-201ENSMUST00000171982 758 ntBASIC15.27■□□□□ 0.04
Trdmt1O55055 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Trdmt1O55055 Gm29705-201ENSMUST00000212598 474 ntBASIC15.27■□□□□ 0.04
Trdmt1O55055 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.27■□□□□ 0.04
Trdmt1O55055 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 Itm2b-204ENSMUST00000228637 783 ntBASIC15.27■□□□□ 0.04
Trdmt1O55055 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trdmt1O55055 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trdmt1O55055 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trdmt1O55055 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.27■□□□□ 0.03
Trdmt1O55055 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trdmt1O55055 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Trdmt1O55055 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Trdmt1O55055 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.27■□□□□ 0.03
Trdmt1O55055 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trdmt1O55055 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Trdmt1O55055 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.26■□□□□ 0.03
Trdmt1O55055 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trdmt1O55055 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.26■□□□□ 0.03
Trdmt1O55055 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC15.26■□□□□ 0.03
Trdmt1O55055 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.26■□□□□ 0.03
Trdmt1O55055 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.26■□□□□ 0.03
Trdmt1O55055 Gm17330-201ENSMUST00000221047 165 ntBASIC15.26■□□□□ 0.03
Trdmt1O55055 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trdmt1O55055 Olfr582-201ENSMUST00000098212 960 ntBASIC15.26■□□□□ 0.03
Trdmt1O55055 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trdmt1O55055 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC15.26■□□□□ 0.03
Trdmt1O55055 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trdmt1O55055 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trdmt1O55055 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.25■□□□□ 0.03
Trdmt1O55055 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.25■□□□□ 0.03
Trdmt1O55055 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.25■□□□□ 0.03
Trdmt1O55055 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
Trdmt1O55055 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trdmt1O55055 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Trdmt1O55055 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.25■□□□□ 0.03
Trdmt1O55055 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trdmt1O55055 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.25■□□□□ 0.03
Trdmt1O55055 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 98.2 ms