Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Banf1O54962 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Banf1O54962 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.18□□□□□ -0.14
Banf1O54962 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14.18□□□□□ -0.14
Banf1O54962 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.18□□□□□ -0.14
Banf1O54962 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Banf1O54962 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.18□□□□□ -0.14
Banf1O54962 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 BC001981-202ENSMUST00000191393 1545 ntBASIC14.18□□□□□ -0.14
Banf1O54962 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.18□□□□□ -0.14
Banf1O54962 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.18□□□□□ -0.14
Banf1O54962 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.18□□□□□ -0.14
Banf1O54962 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Banf1O54962 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Banf1O54962 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Banf1O54962 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Banf1O54962 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.17□□□□□ -0.14
Banf1O54962 Gm6222-201ENSMUST00000120787 396 ntBASIC14.17□□□□□ -0.14
Banf1O54962 Gm13365-201ENSMUST00000121188 973 ntBASIC14.17□□□□□ -0.14
Banf1O54962 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.17□□□□□ -0.14
Banf1O54962 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Banf1O54962 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.17□□□□□ -0.14
Banf1O54962 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Banf1O54962 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.17□□□□□ -0.14
Banf1O54962 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.17□□□□□ -0.14
Banf1O54962 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Banf1O54962 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Banf1O54962 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC14.17□□□□□ -0.14
Banf1O54962 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Banf1O54962 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Banf1O54962 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Banf1O54962 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Banf1O54962 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Banf1O54962 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Banf1O54962 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Banf1O54962 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Banf1O54962 Rprl2-201ENSMUST00000157150 290 ntBASIC14.16□□□□□ -0.14
Banf1O54962 Gm18737-201ENSMUST00000173594 937 ntBASIC14.16□□□□□ -0.14
Banf1O54962 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.16□□□□□ -0.14
Banf1O54962 Gm5264-201ENSMUST00000190584 848 ntBASIC14.16□□□□□ -0.14
Banf1O54962 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.16□□□□□ -0.14
Banf1O54962 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Banf1O54962 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Banf1O54962 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.16□□□□□ -0.14
Banf1O54962 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Banf1O54962 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Banf1O54962 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Banf1O54962 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Banf1O54962 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Banf1O54962 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms