Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Prrt1O35449 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Prrt1O35449 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Prrt1O35449 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Prrt1O35449 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.78□□□□□ -0.52
Prrt1O35449 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Prrt1O35449 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Prrt1O35449 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Prrt1O35449 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.77□□□□□ -0.52
Prrt1O35449 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC11.77□□□□□ -0.52
Prrt1O35449 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.77□□□□□ -0.52
Prrt1O35449 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Prrt1O35449 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Prrt1O35449 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Prrt1O35449 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.77□□□□□ -0.52
Prrt1O35449 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
Prrt1O35449 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.77□□□□□ -0.52
Prrt1O35449 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Prrt1O35449 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Prrt1O35449 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Prrt1O35449 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Prrt1O35449 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Prrt1O35449 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Prrt1O35449 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Prrt1O35449 Gm16026-204ENSMUST00000162652 683 ntBASIC11.77□□□□□ -0.53
Prrt1O35449 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.77□□□□□ -0.53
Prrt1O35449 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Prrt1O35449 Gm45167-201ENSMUST00000208007 322 ntBASIC11.77□□□□□ -0.53
Prrt1O35449 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.77□□□□□ -0.53
Prrt1O35449 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.77□□□□□ -0.53
Prrt1O35449 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Prrt1O35449 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Prrt1O35449 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.76□□□□□ -0.53
Prrt1O35449 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Prrt1O35449 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Prrt1O35449 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Prrt1O35449 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Prrt1O35449 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.76□□□□□ -0.53
Prrt1O35449 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Prrt1O35449 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Prrt1O35449 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Prrt1O35449 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Prrt1O35449 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Prrt1O35449 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Prrt1O35449 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Prrt1O35449 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.76□□□□□ -0.53
Prrt1O35449 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Prrt1O35449 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Prrt1O35449 Gm25990-201ENSMUST00000102440 86 ntBASIC11.76□□□□□ -0.53
Prrt1O35449 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Prrt1O35449 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Prrt1O35449 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Prrt1O35449 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.76□□□□□ -0.53
Prrt1O35449 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Prrt1O35449 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Prrt1O35449 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Prrt1O35449 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Prrt1O35449 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Prrt1O35449 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.76□□□□□ -0.53
Prrt1O35449 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC11.76□□□□□ -0.53
Prrt1O35449 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms