Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Shisa8J3QNX5 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Shisa8J3QNX5 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shisa8J3QNX5 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Shisa8J3QNX5 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Shisa8J3QNX5 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shisa8J3QNX5 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Shisa8J3QNX5 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Shisa8J3QNX5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Shisa8J3QNX5 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.71□□□□□ -0.38
Shisa8J3QNX5 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Shisa8J3QNX5 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Mir5131-201ENSMUST00000175426 93 ntBASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Gm5864-201ENSMUST00000202263 970 ntBASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Shisa8J3QNX5 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Shisa8J3QNX5 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Shisa8J3QNX5 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.69□□□□□ -0.38
Shisa8J3QNX5 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa8J3QNX5 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa8J3QNX5 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa8J3QNX5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.69□□□□□ -0.38
Shisa8J3QNX5 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa8J3QNX5 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa8J3QNX5 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Shisa8J3QNX5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Shisa8J3QNX5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.69□□□□□ -0.38
Shisa8J3QNX5 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms