Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdr1E9Q0B4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Cdr1E9Q0B4 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdr1E9Q0B4 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cdr1E9Q0B4 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdr1E9Q0B4 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cdr1E9Q0B4 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.71□□□□□ -0.22
Cdr1E9Q0B4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Cdr1E9Q0B4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdr1E9Q0B4 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdr1E9Q0B4 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cdr1E9Q0B4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cdr1E9Q0B4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.71□□□□□ -0.22
Cdr1E9Q0B4 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Cdr1E9Q0B4 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdr1E9Q0B4 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cdr1E9Q0B4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdr1E9Q0B4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms