Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Herc1E9PZP8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC7.57□□□□□ -1.2
Herc1E9PZP8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Gm6159-201ENSMUST00000191249 1724 ntBASIC7.57□□□□□ -1.2
Herc1E9PZP8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Gm15573-201ENSMUST00000119487 540 ntBASIC7.57□□□□□ -1.2
Herc1E9PZP8 Gm11637-201ENSMUST00000120601 592 ntBASIC7.57□□□□□ -1.2
Herc1E9PZP8 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC7.57□□□□□ -1.2
Herc1E9PZP8 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Gm44158-201ENSMUST00000203881 505 ntBASIC7.57□□□□□ -1.2
Herc1E9PZP8 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Herc1E9PZP8 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Herc1E9PZP8 AC114543.1-201ENSMUST00000226451 1558 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm9625-201ENSMUST00000180422 955 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm27675-201ENSMUST00000184527 94 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm29615-201ENSMUST00000185371 697 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm28224-201ENSMUST00000186078 697 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm29001-201ENSMUST00000186177 697 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm28292-201ENSMUST00000186593 697 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm28101-201ENSMUST00000187608 697 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm29076-201ENSMUST00000187689 697 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm28302-201ENSMUST00000187931 697 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm28646-201ENSMUST00000188220 697 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm28205-201ENSMUST00000189177 697 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm29032-201ENSMUST00000189797 697 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm28695-201ENSMUST00000190300 697 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm37448-201ENSMUST00000192795 697 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 App-207ENSMUST00000227737 2827 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm15003-201ENSMUST00000118884 446 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm16305-201ENSMUST00000140747 556 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm23675-201ENSMUST00000157311 125 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 AC168058.1-201ENSMUST00000219521 2282 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm15897-201ENSMUST00000117770 1486 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Herc1E9PZP8 AC130671.2-201ENSMUST00000227224 1621 ntBASIC7.56□□□□□ -1.2
Herc1E9PZP8 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC7.56□□□□□ -1.2
Herc1E9PZP8 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Herc1E9PZP8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Herc1E9PZP8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Herc1E9PZP8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Herc1E9PZP8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms