Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Rprl2-201ENSMUST00000157150 290 ntBASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gm28043E0CXC2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14□□□□□ -0.17
Gm28043E0CXC2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Gm28043E0CXC2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC14□□□□□ -0.17
Gm28043E0CXC2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14□□□□□ -0.17
Gm28043E0CXC2 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Gm28043E0CXC2 Gm11745-201ENSMUST00000121669 448 ntBASIC14□□□□□ -0.17
Gm28043E0CXC2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14□□□□□ -0.17
Gm28043E0CXC2 Gm5479-201ENSMUST00000160578 435 ntBASIC14□□□□□ -0.17
Gm28043E0CXC2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14□□□□□ -0.17
Gm28043E0CXC2 Gm27920-201ENSMUST00000183953 96 ntBASIC14□□□□□ -0.17
Gm28043E0CXC2 Gm37935-201ENSMUST00000192012 982 ntBASIC14□□□□□ -0.17
Gm28043E0CXC2 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Gm28043E0CXC2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Gm28043E0CXC2 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Gm38094-201ENSMUST00000195864 2978 ntBASIC14□□□□□ -0.17
Gm28043E0CXC2 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14□□□□□ -0.17
Gm28043E0CXC2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gm28043E0CXC2 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Gm28043E0CXC2 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Gm45098-201ENSMUST00000207179 657 ntBASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Gm9182-201ENSMUST00000217829 639 ntBASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 AC131187.1-201ENSMUST00000224567 809 ntBASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gm28043E0CXC2 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms