Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.86□□□□□ -0.35
Slc22a28B2RT89 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Gm18027-201ENSMUST00000218947 619 ntBASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Acot6-202ENSMUST00000222921 3622 ntBASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Slc22a28B2RT89 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Gm10175-201ENSMUST00000086013 645 ntBASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Slc22a28B2RT89 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Gm27631-201ENSMUST00000184163 466 ntBASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 AC149588.3-201ENSMUST00000227515 150 ntBASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Mir125a-201ENSMUST00000083545 68 ntBASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Slc22a28B2RT89 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms