Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 AC174678.1-201ENSMUST00000228007 2749 ntBASIC11.16□□□□□ -0.62
Chd6A3KFM7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.16□□□□□ -0.62
Chd6A3KFM7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Gm7809-201ENSMUST00000153199 742 ntBASIC11.16□□□□□ -0.62
Chd6A3KFM7 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Gm37042-201ENSMUST00000193816 581 ntBASIC11.16□□□□□ -0.62
Chd6A3KFM7 Gm30285-201ENSMUST00000214614 422 ntBASIC11.16□□□□□ -0.62
Chd6A3KFM7 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.16□□□□□ -0.62
Chd6A3KFM7 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Chd6A3KFM7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.15□□□□□ -0.62
Chd6A3KFM7 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Gm19353-201ENSMUST00000184561 445 ntBASIC11.15□□□□□ -0.62
Chd6A3KFM7 Gm43752-201ENSMUST00000198475 697 ntBASIC11.15□□□□□ -0.62
Chd6A3KFM7 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Chd6A3KFM7 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Gm8749-201ENSMUST00000117737 331 ntBASIC11.15□□□□□ -0.62
Chd6A3KFM7 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.15□□□□□ -0.62
Chd6A3KFM7 Gm8927-201ENSMUST00000181978 981 ntBASIC11.15□□□□□ -0.62
Chd6A3KFM7 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.15□□□□□ -0.62
Chd6A3KFM7 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Chd6A3KFM7 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
Chd6A3KFM7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Chd6A3KFM7 Gm13888-201ENSMUST00000119148 422 ntBASIC11.15□□□□□ -0.63
Chd6A3KFM7 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.15□□□□□ -0.63
Chd6A3KFM7 Mir6923-201ENSMUST00000184592 72 ntBASIC11.15□□□□□ -0.63
Chd6A3KFM7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC11.15□□□□□ -0.63
Chd6A3KFM7 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.15□□□□□ -0.63
Chd6A3KFM7 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Chd6A3KFM7 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.14□□□□□ -0.63
Chd6A3KFM7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Chd6A3KFM7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.14□□□□□ -0.63
Chd6A3KFM7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms