Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm14451-201ENSMUST00000121581 1542 ntBASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Trav6n-6A0A075B6B2 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Pck2-205ENSMUST00000226352 2784 ntBASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Mir3113-201ENSMUST00000175478 76 ntBASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm27301-201ENSMUST00000184012 127 ntBASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm2213-201ENSMUST00000197485 688 ntBASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 AW822252-206ENSMUST00000208904 237 ntBASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Trav6n-6A0A075B6B2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Gm5264-201ENSMUST00000190584 848 ntBASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 AC090659.1-201ENSMUST00000224334 768 ntBASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 AC154572.2-201ENSMUST00000225105 997 ntBASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Trav6n-6A0A075B6B2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms