Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Gm45612-201ENSMUST00000211320 160 ntBASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
H2afb3S4R1G7 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Rprl2-201ENSMUST00000157150 290 ntBASIC12.56□□□□□ -0.4
H2afb3S4R1G7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.56□□□□□ -0.4
H2afb3S4R1G7 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Matn2-206ENSMUST00000228570 2798 ntBASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
H2afb3S4R1G7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Gm14494-201ENSMUST00000118786 435 ntBASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Gm44608-201ENSMUST00000206827 855 ntBASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 AC158529.1-201ENSMUST00000223618 239 ntBASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
H2afb3S4R1G7 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms