Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcb1Q9Z0H3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcb1Q9Z0H3 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcb1Q9Z0H3 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcb1Q9Z0H3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Mir692-1-201ENSMUST00000102263 109 ntBASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcb1Q9Z0H3 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcb1Q9Z0H3 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Gm15429-201ENSMUST00000151268 798 ntBASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Gm2445-201ENSMUST00000182798 989 ntBASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Gm27892-201ENSMUST00000185017 106 ntBASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Gm24447-201ENSMUST00000083977 338 ntBASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Gm5356-201ENSMUST00000093326 615 ntBASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcb1Q9Z0H3 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.42□□□□□ -0.1
Smarcb1Q9Z0H3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms