Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdh17Q9R100 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.61□□□□□ -0.23
Cdh17Q9R100 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Gm29741-201ENSMUST00000192667 421 ntBASIC13.61□□□□□ -0.23
Cdh17Q9R100 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.61□□□□□ -0.23
Cdh17Q9R100 Gm43125-201ENSMUST00000201724 730 ntBASIC13.61□□□□□ -0.23
Cdh17Q9R100 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.61□□□□□ -0.23
Cdh17Q9R100 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdh17Q9R100 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Gm5566-201ENSMUST00000116118 459 ntBASIC13.6□□□□□ -0.23
Cdh17Q9R100 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Gm37714-201ENSMUST00000194742 342 ntBASIC13.6□□□□□ -0.23
Cdh17Q9R100 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.6□□□□□ -0.23
Cdh17Q9R100 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cdh17Q9R100 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.59□□□□□ -0.23
Cdh17Q9R100 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.59□□□□□ -0.23
Cdh17Q9R100 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Dupd1-202ENSMUST00000224735 548 ntBASIC13.59□□□□□ -0.23
Cdh17Q9R100 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.59□□□□□ -0.23
Cdh17Q9R100 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cdh17Q9R100 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms