Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.11□□□□□ -0.15
Rnf4Q9QZS2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Gm2445-201ENSMUST00000182798 989 ntBASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Gm17807-201ENSMUST00000186869 298 ntBASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Rnf4Q9QZS2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 AC164107.1-201ENSMUST00000227730 2161 ntBASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rnf4Q9QZS2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf4Q9QZS2 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Rnf4Q9QZS2 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Rnf4Q9QZS2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rnf4Q9QZS2 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Gm6089-201ENSMUST00000197666 938 ntBASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rnf4Q9QZS2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms