Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trem1Q9JKE2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Rprl3-201ENSMUST00000157400 290 ntBASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trem1Q9JKE2 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Gm8344-201ENSMUST00000119813 856 ntBASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Gm27867-201ENSMUST00000184778 125 ntBASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trem1Q9JKE2 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trem1Q9JKE2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms