Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmg20aQ9DC33 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Hmg20aQ9DC33 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Gm15372-201ENSMUST00000120729 834 ntBASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Gm9726-201ENSMUST00000180321 678 ntBASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 AC158538.1-201ENSMUST00000225870 294 ntBASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.74□□□□□ -0.37
Hmg20aQ9DC33 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Gm20554-201ENSMUST00000177421 2352 ntBASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Gm14859-201ENSMUST00000117752 357 ntBASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Gm12644-201ENSMUST00000119935 606 ntBASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Gm10499-201ENSMUST00000174094 934 ntBASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Hmg20aQ9DC33 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmg20aQ9DC33 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms