Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Gm9229-201ENSMUST00000222777 126 ntBASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chmp4bQ9D8B3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Mir1897-201ENSMUST00000122581 272 ntBASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Shd-206ENSMUST00000225145 998 ntBASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.59■□□□□ 0.41
Chmp4bQ9D8B3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
Chmp4bQ9D8B3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Chmp4bQ9D8B3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp4bQ9D8B3 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chmp4bQ9D8B3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Chmp4bQ9D8B3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.58■□□□□ 0.4
Chmp4bQ9D8B3 AC153872.1-201ENSMUST00000199539 128 ntBASIC17.58■□□□□ 0.4
Chmp4bQ9D8B3 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4bQ9D8B3 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Chmp4bQ9D8B3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4bQ9D8B3 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4bQ9D8B3 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4bQ9D8B3 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4bQ9D8B3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Chmp4bQ9D8B3 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chmp4bQ9D8B3 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Gm15460-201ENSMUST00000118147 391 ntBASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Gm25948-201ENSMUST00000175334 112 ntBASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Gm5425-201ENSMUST00000214125 459 ntBASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Chmp4bQ9D8B3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms