Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Gm15427-201ENSMUST00000117288 531 ntBASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Gm15957-201ENSMUST00000118893 974 ntBASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Gm20553-201ENSMUST00000204205 844 ntBASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Gm44608-201ENSMUST00000206827 855 ntBASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chmp5Q9D7S9 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chmp5Q9D7S9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Chmp5Q9D7S9 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp5Q9D7S9 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Gm10729-202ENSMUST00000193403 1375 ntBASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Chmp5Q9D7S9 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Gm2445-201ENSMUST00000182798 989 ntBASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.43■□□□□ 0.38
Chmp5Q9D7S9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms