Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Gm2810-201ENSMUST00000118681 990 ntBASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Gm14822-201ENSMUST00000122247 291 ntBASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Chmp4cQ9D7F7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Chmp4cQ9D7F7 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Rprl2-201ENSMUST00000157150 290 ntBASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Chmp4cQ9D7F7 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Gm18889-201ENSMUST00000174284 929 ntBASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Gm38225-201ENSMUST00000194001 393 ntBASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Chmp4cQ9D7F7 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Gm13015-201ENSMUST00000118674 204 ntBASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Chmp4cQ9D7F7 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms