Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.44□□□□□ -0.1
Nop56Q9D6Z1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Gm13036-201ENSMUST00000117799 748 ntBASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Gm10060-201ENSMUST00000212002 111 ntBASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nop56Q9D6Z1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nop56Q9D6Z1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Gm45747-201ENSMUST00000212203 999 ntBASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Grk6-205ENSMUST00000224653 2976 ntBASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nop56Q9D6Z1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms