Protein–RNA interactions for Protein: Q9D287

Bcas2, Pre-mRNA-splicing factor SPF27, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bcas2Q9D287 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.55□□□□□ -0.24
Bcas2Q9D287 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Bcas2Q9D287 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Bcas2Q9D287 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Bcas2Q9D287 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Bcas2Q9D287 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Bcas2Q9D287 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Bcas2Q9D287 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Bcas2Q9D287 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Bcas2Q9D287 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.55□□□□□ -0.24
Bcas2Q9D287 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.55□□□□□ -0.24
Bcas2Q9D287 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Bcas2Q9D287 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Bcas2Q9D287 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Bcas2Q9D287 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Bcas2Q9D287 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Bcas2Q9D287 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Bcas2Q9D287 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Bcas2Q9D287 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Gm27397-201ENSMUST00000184997 107 ntBASIC13.54□□□□□ -0.24
Bcas2Q9D287 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.54□□□□□ -0.24
Bcas2Q9D287 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Bcas2Q9D287 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Gm11594-201ENSMUST00000122313 162 ntBASIC13.53□□□□□ -0.24
Bcas2Q9D287 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.53□□□□□ -0.24
Bcas2Q9D287 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Bcas2Q9D287 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Bcas2Q9D287 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.52□□□□□ -0.24
Bcas2Q9D287 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Bcas2Q9D287 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Bcas2Q9D287 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Bcas2Q9D287 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Bcas2Q9D287 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Bcas2Q9D287 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Bcas2Q9D287 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.52□□□□□ -0.25
Bcas2Q9D287 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.52□□□□□ -0.25
Bcas2Q9D287 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.52□□□□□ -0.25
Bcas2Q9D287 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.52□□□□□ -0.25
Bcas2Q9D287 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.52□□□□□ -0.25
Bcas2Q9D287 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms