Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Gm25925-201ENSMUST00000158314 306 ntBASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Gm9727-201ENSMUST00000161387 555 ntBASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Snf8Q9CZ28 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Snf8Q9CZ28 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.36□□□□□ -0.11
Snf8Q9CZ28 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Gm6443-201ENSMUST00000203599 874 ntBASIC14.35□□□□□ -0.11
Snf8Q9CZ28 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.35□□□□□ -0.11
Snf8Q9CZ28 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Snf8Q9CZ28 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms