Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssr1Q9CY50 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssr1Q9CY50 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Ssr1Q9CY50 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssr1Q9CY50 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssr1Q9CY50 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssr1Q9CY50 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ssr1Q9CY50 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.19■□□□□ 0.02
Ssr1Q9CY50 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Ssr1Q9CY50 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Matn2-206ENSMUST00000228570 2798 ntBASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Gm6973-201ENSMUST00000117080 721 ntBASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Mir8117-201ENSMUST00000184773 107 ntBASIC15.18■□□□□ 0.02
Ssr1Q9CY50 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ssr1Q9CY50 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.17■□□□□ 0.02
Ssr1Q9CY50 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ssr1Q9CY50 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms