Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Gm9252-201ENSMUST00000172364 1602 ntBASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
RTRAFQ9CQE8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
RTRAFQ9CQE8 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Gm27646-201ENSMUST00000183989 110 ntBASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
RTRAFQ9CQE8 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Cmtm5-203ENSMUST00000227441 610 ntBASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RTRAFQ9CQE8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
RTRAFQ9CQE8 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RTRAFQ9CQE8 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.31□□□□□ -0.6
RTRAFQ9CQE8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms