Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm18057-201ENSMUST00000208220 503 ntBASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Nipsnap3bQ9CQE1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm2810-201ENSMUST00000118681 990 ntBASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Nipsnap3bQ9CQE1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm15467-201ENSMUST00000120582 445 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm18737-201ENSMUST00000173594 937 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm29310-201ENSMUST00000185468 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm21825-201ENSMUST00000185728 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm29109-201ENSMUST00000185895 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm21896-201ENSMUST00000186520 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm21873-201ENSMUST00000186728 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm21794-201ENSMUST00000187056 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm21880-201ENSMUST00000187275 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm21826-201ENSMUST00000187451 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm21198-201ENSMUST00000188393 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm21749-201ENSMUST00000189343 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm21901-201ENSMUST00000189568 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm29424-201ENSMUST00000189716 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm28599-201ENSMUST00000189838 694 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm21867-201ENSMUST00000189917 696 ntBASIC13.75□□□□□ -0.21
Nipsnap3bQ9CQE1 Gm29269-201ENSMUST00000190087 696 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms