Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Krt88Q9CPR6 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Krt88Q9CPR6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Krt88Q9CPR6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Krt88Q9CPR6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Krt88Q9CPR6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Krt88Q9CPR6 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.58□□□□□ -0.39
Krt88Q9CPR6 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Krt88Q9CPR6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Krt88Q9CPR6 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Gm27300-201ENSMUST00000184085 97 ntBASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Gm27335-201ENSMUST00000184758 97 ntBASIC12.58□□□□□ -0.4
Krt88Q9CPR6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Krt88Q9CPR6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms