Protein–RNA interactions for Protein: Q99NE9

Pbx4, Pre-B-cell leukemia transcription factor 4, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx4Q99NE9 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 AA914427-201ENSMUST00000193194 1166 ntBASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Gm45219-201ENSMUST00000205602 465 ntBASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Gm44551-201ENSMUST00000208804 171 ntBASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Gm10752-201ENSMUST00000218348 729 ntBASIC15.11■□□□□ 0.01
Pbx4Q99NE9 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.11■□□□□ 0.01
Pbx4Q99NE9 CT025551.1-201ENSMUST00000223996 692 ntBASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Pbx4Q99NE9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Gm18893-201ENSMUST00000198416 943 ntBASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pbx4Q99NE9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.09■□□□□ 0.01
Pbx4Q99NE9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.09■□□□□ 0.01
Pbx4Q99NE9 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pbx4Q99NE9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pbx4Q99NE9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Pbx4Q99NE9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pbx4Q99NE9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pbx4Q99NE9 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.08■□□□□ 0
Pbx4Q99NE9 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pbx4Q99NE9 Gm23270-201ENSMUST00000104055 131 ntBASIC15.08■□□□□ 0
Pbx4Q99NE9 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pbx4Q99NE9 Gm24548-201ENSMUST00000158650 108 ntBASIC15.08■□□□□ 0
Pbx4Q99NE9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC15.08■□□□□ 0
Pbx4Q99NE9 Gm26956-201ENSMUST00000182176 986 ntBASIC15.08■□□□□ 0
Pbx4Q99NE9 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
Pbx4Q99NE9 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pbx4Q99NE9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.08■□□□□ 0
Pbx4Q99NE9 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pbx4Q99NE9 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pbx4Q99NE9 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pbx4Q99NE9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pbx4Q99NE9 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pbx4Q99NE9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms