Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.8□□□□□ -0.2
Clcc1Q99LI2 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Clcc1Q99LI2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 AC155286.1-201ENSMUST00000218632 448 ntBASIC13.78□□□□□ -0.2
Clcc1Q99LI2 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Clcc1Q99LI2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms