Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RtcbQ99LF4 Gm13369-201ENSMUST00000119442 987 ntBASIC17.13■□□□□ 0.33
RtcbQ99LF4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RtcbQ99LF4 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RtcbQ99LF4 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RtcbQ99LF4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RtcbQ99LF4 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC17.13■□□□□ 0.33
RtcbQ99LF4 Gm9368-201ENSMUST00000219348 831 ntBASIC17.13■□□□□ 0.33
RtcbQ99LF4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RtcbQ99LF4 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RtcbQ99LF4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RtcbQ99LF4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RtcbQ99LF4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RtcbQ99LF4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RtcbQ99LF4 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RtcbQ99LF4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RtcbQ99LF4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RtcbQ99LF4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RtcbQ99LF4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Gm26927-201ENSMUST00000182385 965 ntBASIC17.12■□□□□ 0.33
RtcbQ99LF4 Gm29199-201ENSMUST00000187766 775 ntBASIC17.12■□□□□ 0.33
RtcbQ99LF4 Gm38341-201ENSMUST00000195357 515 ntBASIC17.12■□□□□ 0.33
RtcbQ99LF4 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Cts7-204ENSMUST00000225321 1257 ntBASIC17.12■□□□□ 0.33
RtcbQ99LF4 Gm2824-203ENSMUST00000226189 1228 ntBASIC17.12■□□□□ 0.33
RtcbQ99LF4 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC17.12■□□□□ 0.33
RtcbQ99LF4 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Gm15808-201ENSMUST00000119046 604 ntBASIC17.11■□□□□ 0.33
RtcbQ99LF4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Gm29608-201ENSMUST00000190444 463 ntBASIC17.11■□□□□ 0.33
RtcbQ99LF4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC17.11■□□□□ 0.33
RtcbQ99LF4 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RtcbQ99LF4 AC093022.1-201ENSMUST00000226949 1072 ntBASIC17.11■□□□□ 0.33
RtcbQ99LF4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Rn7sk-201ENSMUST00000083103 331 ntBASIC17.11■□□□□ 0.33
RtcbQ99LF4 Gm26315-201ENSMUST00000083890 321 ntBASIC17.11■□□□□ 0.33
RtcbQ99LF4 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.11■□□□□ 0.33
RtcbQ99LF4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RtcbQ99LF4 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Mir686-201ENSMUST00000102174 109 ntBASIC17.1■□□□□ 0.33
RtcbQ99LF4 Gm26083-201ENSMUST00000157904 193 ntBASIC17.1■□□□□ 0.33
RtcbQ99LF4 Rn7s1-201ENSMUST00000174924 300 ntBASIC17.1■□□□□ 0.33
RtcbQ99LF4 Rn7s2-201ENSMUST00000175032 300 ntBASIC17.1■□□□□ 0.33
RtcbQ99LF4 Gm26461-201ENSMUST00000175064 290 ntBASIC17.1■□□□□ 0.33
RtcbQ99LF4 Gm37497-201ENSMUST00000195830 798 ntBASIC17.1■□□□□ 0.33
RtcbQ99LF4 Olfr284-202ENSMUST00000206647 966 ntBASIC17.1■□□□□ 0.33
RtcbQ99LF4 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RtcbQ99LF4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms