Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdha8Q91Y12 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Gm14701-201ENSMUST00000117156 348 ntBASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdha8Q91Y12 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Gm15693-201ENSMUST00000120470 637 ntBASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Mir125a-201ENSMUST00000083545 68 ntBASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pcdha8Q91Y12 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.6□□□□□ -0.23
Pcdha8Q91Y12 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha8Q91Y12 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha8Q91Y12 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha8Q91Y12 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha8Q91Y12 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha8Q91Y12 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdha8Q91Y12 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Pcdha8Q91Y12 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdha8Q91Y12 Gm6415-201ENSMUST00000118488 348 ntBASIC13.6□□□□□ -0.23
Pcdha8Q91Y12 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Pcdha8Q91Y12 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Pcdha8Q91Y12 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Pcdha8Q91Y12 AA543401-201ENSMUST00000164248 1269 ntBASIC13.6□□□□□ -0.23
Pcdha8Q91Y12 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms