Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb2Q91Y00 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb2Q91Y00 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.85□□□□□ -0.03
Pcdhb2Q91Y00 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb2Q91Y00 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb2Q91Y00 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb2Q91Y00 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Pcdhb2Q91Y00 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb2Q91Y00 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Pcdhb2Q91Y00 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Gm44855-201ENSMUST00000205725 362 ntBASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Syt7-205ENSMUST00000224135 1557 ntBASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Pcdhb2Q91Y00 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Pcdhb2Q91Y00 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb2Q91Y00 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Pcdhb2Q91Y00 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb2Q91Y00 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb2Q91Y00 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Pcdhb2Q91Y00 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.83□□□□□ -0.03
Pcdhb2Q91Y00 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
Pcdhb2Q91Y00 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Gm8584-201ENSMUST00000171982 758 ntBASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Pcdhb2Q91Y00 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 Gm15321-201ENSMUST00000121290 288 ntBASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.82□□□□□ -0.04
Pcdhb2Q91Y00 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms