Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx41Q91VN6 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Kcnk16-202ENSMUST00000225596 2127 ntBASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx41Q91VN6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Gm12859-201ENSMUST00000117834 427 ntBASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Gm7390-201ENSMUST00000212452 1216 ntBASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Ddx41Q91VN6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Gm22189-201ENSMUST00000103822 86 ntBASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Gm9522-201ENSMUST00000182394 926 ntBASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Ddx41Q91VN6 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms