Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.62□□□□□ -0.23
Q8VDP2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Q8VDP2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Q8VDP2 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Mir770-201ENSMUST00000103252 94 ntBASIC13.62□□□□□ -0.23
Q8VDP2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Q8VDP2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.62□□□□□ -0.23
Q8VDP2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Q8VDP2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.62□□□□□ -0.23
Q8VDP2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Q8VDP2 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.62□□□□□ -0.23
Q8VDP2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Q8VDP2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.61□□□□□ -0.23
Q8VDP2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Q8VDP2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Q8VDP2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.61□□□□□ -0.23
Q8VDP2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Gm6257-201ENSMUST00000163864 910 ntBASIC13.61□□□□□ -0.23
Q8VDP2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.61□□□□□ -0.23
Q8VDP2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.61□□□□□ -0.23
Q8VDP2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Q8VDP2 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.61□□□□□ -0.23
Q8VDP2 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.61□□□□□ -0.23
Q8VDP2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
Q8VDP2 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Q8VDP2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Q8VDP2 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Q8VDP2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.6□□□□□ -0.23
Q8VDP2 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Q8VDP2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Q8VDP2 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Q8VDP2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Q8VDP2 Mir3081-201ENSMUST00000175305 84 ntBASIC13.6□□□□□ -0.23
Q8VDP2 Gm6157-201ENSMUST00000199935 1897 ntBASIC13.6□□□□□ -0.23
Q8VDP2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Q8VDP2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Q8VDP2 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Q8VDP2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Q8VDP2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Q8VDP2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Q8VDP2 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Q8VDP2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms