Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uhrf1Q8VDF2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uhrf1Q8VDF2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uhrf1Q8VDF2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Uhrf1Q8VDF2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Uhrf1Q8VDF2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Uhrf1Q8VDF2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uhrf1Q8VDF2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Uhrf1Q8VDF2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uhrf1Q8VDF2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Gm8213-201ENSMUST00000118191 441 ntBASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Gm10156-201ENSMUST00000122364 462 ntBASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Uhrf1Q8VDF2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Gm29705-201ENSMUST00000212598 474 ntBASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Uhrf1Q8VDF2 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Uhrf1Q8VDF2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Uhrf1Q8VDF2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Uhrf1Q8VDF2 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.33□□□□□ -0.12
Uhrf1Q8VDF2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Uhrf1Q8VDF2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Uhrf1Q8VDF2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Uhrf1Q8VDF2 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Uhrf1Q8VDF2 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.33□□□□□ -0.12
Uhrf1Q8VDF2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Uhrf1Q8VDF2 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Uhrf1Q8VDF2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Uhrf1Q8VDF2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Uhrf1Q8VDF2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Uhrf1Q8VDF2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Uhrf1Q8VDF2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms