Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ndc1Q8VCB1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Gm9797-201ENSMUST00000052902 613 ntBASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ndc1Q8VCB1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Gm21854-201ENSMUST00000179901 471 ntBASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Gm28760-201ENSMUST00000185995 736 ntBASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Gm10766-202ENSMUST00000194123 606 ntBASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Gm9794-201ENSMUST00000202370 423 ntBASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Ndc1Q8VCB1 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ndc1Q8VCB1 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms