Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Mir698-201ENSMUST00000102164 109 ntBASIC15.32■□□□□ 0.04
Rpap2Q8VC34 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Gm7390-201ENSMUST00000212452 1216 ntBASIC15.32■□□□□ 0.04
Rpap2Q8VC34 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.32■□□□□ 0.04
Rpap2Q8VC34 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Rpap2Q8VC34 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Gm8927-201ENSMUST00000181978 981 ntBASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Mir7023-201ENSMUST00000185093 64 ntBASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Gm5425-201ENSMUST00000214125 459 ntBASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 AC166997.1-201ENSMUST00000225122 572 ntBASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Gm3222-201ENSMUST00000071282 990 ntBASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Rpap2Q8VC34 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Mir7684-201ENSMUST00000183858 60 ntBASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Mir8102-201ENSMUST00000184148 139 ntBASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Rpap2Q8VC34 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rpap2Q8VC34 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms