Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Gm44891-201ENSMUST00000208817 2223 ntBASIC16.8■□□□□ 0.28
Ccdc9Q8VC31 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Rprl3-201ENSMUST00000157400 290 ntBASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Ccdc9Q8VC31 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ccdc9Q8VC31 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Ccdc9Q8VC31 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc9Q8VC31 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc9Q8VC31 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc9Q8VC31 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc9Q8VC31 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc9Q8VC31 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc9Q8VC31 Gm8584-201ENSMUST00000171982 758 ntBASIC16.77■□□□□ 0.28
Ccdc9Q8VC31 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.77■□□□□ 0.28
Ccdc9Q8VC31 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc9Q8VC31 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc9Q8VC31 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ccdc9Q8VC31 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.27
Ccdc9Q8VC31 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc9Q8VC31 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc9Q8VC31 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Ccdc9Q8VC31 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc9Q8VC31 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Ccdc9Q8VC31 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Ccdc9Q8VC31 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC16.77■□□□□ 0.27
Ccdc9Q8VC31 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Ccdc9Q8VC31 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms