Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Gm17837-201ENSMUST00000186435 985 ntBASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Gm29741-201ENSMUST00000192667 421 ntBASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Gm44344-201ENSMUST00000200287 129 ntBASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Gm19863-201ENSMUST00000192480 2218 ntBASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Top1mtQ8R4U6 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Top1mtQ8R4U6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
Top1mtQ8R4U6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
Top1mtQ8R4U6 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Top1mtQ8R4U6 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Gm27680-201ENSMUST00000184192 160 ntBASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Gm5867-201ENSMUST00000063197 592 ntBASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Top1mtQ8R4U6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Gm13223-201ENSMUST00000118609 747 ntBASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Gm14767-201ENSMUST00000121559 586 ntBASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Top1mtQ8R4U6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Top1mtQ8R4U6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Top1mtQ8R4U6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Top1mtQ8R4U6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Top1mtQ8R4U6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms