Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup85Q8R480 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Nup85Q8R480 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.38□□□□□ -0.11
Nup85Q8R480 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup85Q8R480 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup85Q8R480 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup85Q8R480 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup85Q8R480 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup85Q8R480 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nup85Q8R480 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Nup85Q8R480 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nup85Q8R480 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.37□□□□□ -0.11
Nup85Q8R480 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Nup85Q8R480 Gm27631-201ENSMUST00000184163 466 ntBASIC14.37□□□□□ -0.11
Nup85Q8R480 AA619741-201ENSMUST00000195095 646 ntBASIC14.37□□□□□ -0.11
Nup85Q8R480 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.37□□□□□ -0.11
Nup85Q8R480 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.37□□□□□ -0.11
Nup85Q8R480 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.37□□□□□ -0.11
Nup85Q8R480 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.37□□□□□ -0.11
Nup85Q8R480 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.37□□□□□ -0.11
Nup85Q8R480 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.37□□□□□ -0.11
Nup85Q8R480 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nup85Q8R480 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Nup85Q8R480 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Nup85Q8R480 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Nup85Q8R480 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Nup85Q8R480 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Gm45453-201ENSMUST00000211758 853 ntBASIC14.36□□□□□ -0.11
Nup85Q8R480 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Nup85Q8R480 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nup85Q8R480 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nup85Q8R480 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nup85Q8R480 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Nup85Q8R480 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Nup85Q8R480 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.35□□□□□ -0.11
Nup85Q8R480 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup85Q8R480 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup85Q8R480 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup85Q8R480 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup85Q8R480 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nup85Q8R480 Gm15957-201ENSMUST00000118893 974 ntBASIC14.35□□□□□ -0.11
Nup85Q8R480 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nup85Q8R480 Gm5866-201ENSMUST00000177881 973 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms