Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Gm21769-201ENSMUST00000211922 111 ntBASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Rn7sk-201ENSMUST00000083103 331 ntBASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Gm26315-201ENSMUST00000083890 321 ntBASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Ddx54Q8K4L0 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Gm9347-201ENSMUST00000211473 1607 ntBASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Gm2606-201ENSMUST00000100754 1002 ntBASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Gm12537-201ENSMUST00000119266 1002 ntBASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Gm12070-201ENSMUST00000119551 1002 ntBASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Gm12671-201ENSMUST00000119978 1002 ntBASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Gm13292-201ENSMUST00000120014 1000 ntBASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Gm10359-201ENSMUST00000180167 1002 ntBASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Gm12033-201ENSMUST00000180654 1002 ntBASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Gm5559-201ENSMUST00000180755 1002 ntBASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Gm42997-202ENSMUST00000200321 985 ntBASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Gm7293-201ENSMUST00000216682 1007 ntBASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Abhd11os-203ENSMUST00000222613 363 ntBASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ddx54Q8K4L0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Mir698-201ENSMUST00000102164 109 ntBASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Gm22334-201ENSMUST00000158070 133 ntBASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Mir5120-201ENSMUST00000175020 78 ntBASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Gm29787-201ENSMUST00000222129 849 ntBASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ddx54Q8K4L0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ddx54Q8K4L0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms