Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Gm27306-201ENSMUST00000183970 107 ntBASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Gm17837-201ENSMUST00000186435 985 ntBASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rfwd3Q8CIK8 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Mir1897-201ENSMUST00000122581 272 ntBASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Rfwd3Q8CIK8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Gm27321-201ENSMUST00000185021 205 ntBASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Gm10576-201ENSMUST00000191927 825 ntBASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Gm44344-201ENSMUST00000200287 129 ntBASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Rfwd3Q8CIK8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Rfwd3Q8CIK8 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Rfwd3Q8CIK8 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.14□□□□□ -0.31
Rfwd3Q8CIK8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rfwd3Q8CIK8 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Rfwd3Q8CIK8 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms