Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm20910-201ENSMUST00000193268 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm21871-201ENSMUST00000194621 696 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Shd-206ENSMUST00000225145 998 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.29□□□□□ -0.12
CopaQ8CIE6 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CopaQ8CIE6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.28□□□□□ -0.12
CopaQ8CIE6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CopaQ8CIE6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CopaQ8CIE6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CopaQ8CIE6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CopaQ8CIE6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CopaQ8CIE6 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.27□□□□□ -0.12
CopaQ8CIE6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CopaQ8CIE6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CopaQ8CIE6 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.27□□□□□ -0.12
CopaQ8CIE6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CopaQ8CIE6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CopaQ8CIE6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
CopaQ8CIE6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CopaQ8CIE6 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CopaQ8CIE6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CopaQ8CIE6 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CopaQ8CIE6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Gm14719-201ENSMUST00000121891 340 ntBASIC14.27□□□□□ -0.13
CopaQ8CIE6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC14.27□□□□□ -0.13
CopaQ8CIE6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.27□□□□□ -0.13
CopaQ8CIE6 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CopaQ8CIE6 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CopaQ8CIE6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CopaQ8CIE6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CopaQ8CIE6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CopaQ8CIE6 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.26□□□□□ -0.13
CopaQ8CIE6 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CopaQ8CIE6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.26□□□□□ -0.13
CopaQ8CIE6 Olfr286-202ENSMUST00000205305 969 ntBASIC14.26□□□□□ -0.13
CopaQ8CIE6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CopaQ8CIE6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.26□□□□□ -0.13
CopaQ8CIE6 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CopaQ8CIE6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CopaQ8CIE6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CopaQ8CIE6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CopaQ8CIE6 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms